Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015829023.1_cds_XP_016503581.1_17113
CDS Infomation

[gene=LOC107821661] [db_xref=GeneID:107821661] [protein=zinc phosphodiesterase ELAC protein 2-like isoform X2] [protein_id=XP_016503581.1] [location=complement(join(47400..47714,47814..48333,48424..48773,49044..49094,49199..49346,49451..49719,49815..50264))] [gbkey=CDS]
Sequence

ATGAAATCGTTCGTCCCTAATGCTGCCATGGTTCATACGCATAGTGTTCTCTCAACGCAT
GGATCAAATGAAGTTGCTAGTGCTGATTCAATGAAGTTTGATCATCTTTATGTTCCCATT
GTTGATGAAGTTGTCAAAATATGTGCTATTCCCTTGCGACCACGTTGCTCGAAAGTGTGT
GACCCAATGAAGGAAGGATCCTCCAAGCTAAATGCTCCACTAGTTGACGACTACCATTTT
GCAGAAGACCTTCAAGCTCAAATGAAGAATTCCACAGCTGAAGATGCATTAGATCCAGGT
GATATTTCGGTGGTTTATATTTGTGAGTTTCCGGAGATTAAAGGGAAGCTCGATCGAGAT
AAGGCTGCTGAGCTTGGGTTGGAAAGTGGGCCAAAATATGGTGAATTGAAACGTGGGAAT
CCAGTGAAGTCAGATCACCTAGATAGAACAATTCACCCTTGTGATGTTATGGAGCCTTCC
TTTCCCGGTCCTATTGTGCTCCTCGTTGACTGCCCAACACTCTCTCATTTGCAAGAGCTG
TCATCTTTGCAGTCTCTTACTCTGTATTACTCAAATACATCCGAACAACCTGTTGAAATG
TGCAAAAAAGTAAATTGTTTAATACACCTTAGCCCTGCATCTGTAACAAATACAACTGCA
TATGAGCAATGGATGACCAGATTTGGTGAAGCCCAGCACATAATGGCAGGACACGAGCCG
AAGAATATTGAGATTCCAATTCTGAAGTCCAGTTCAAGAATTGCTGCAAAACTTAACTAC
CTGTGCCCTCAATTCTTTCCTGCTCCTGGTTTTTTGACCCTTAAGCAGTTGAAGAGCTTA
CCATCAGTCTCAAGGTTCCCGAGGGAGTTGTCTCTTCCAACCTCATGTCGATTCATTTAT
GCGGAGAACCTCCTCAAGTTTAATCTTCTTCCATATAAAGACCTTGGATTAGACAATTCT
GGTGTTGCTGATACTTTTTCTCGGACAGAAATCATAGATGAACTAACTTCGGAAATTCCA
GAAATTGTAAGTGCTTCTGAACATATTATCCAACTGTGGCATGGGAACAATGGAACAAAT
GGAGGCACTCCATTACCTAGCTGTTTGGAAGGTATAACAAGAGAGGATATGGAGATTGTT
CTTCTTGGAACTGGTTCATCGCAGCCTTCAAAATACCGAAATGTTAGTTCTATATTTATT
AATCTTTTCTCAAAGGGAGGTATTCTGTTAGATTGTGGTGAAGGAACACTGGGACAGCTA
AAAAGAAGATTTGGTGTTGAAGGTGCTGATGAAGCTGTGAAGGGTTTAAGGTGTATTTGG
ATTTCTCATATTCACGCGGATCATCATGCGGGTCTTGCAAGAATTCTTACTCTGAGACGT
GATTTACTCAATGAAACTCCCCATGAACCTTTAATTGTTGTAGGTCCTCAGCAACTTGAG
ATATTTCTTGATAGGTACCAAATGCTCGAGGATCTAGATATGCAGTTCCTCGATAGTAGG
GATACTACAAAATCTTCATGGGAGGCTTTTGAGTTGAACGAAGACAATGATGCTAATGGG
AGTGCGAGCAGACTAAAGAACACGCTCAGAGAATCAGGACTGATATCATTGAATAGTGTT
CCCGTTATTCATTGTCCGCAAGCTTATGGAATCGTCCTGAAGGCTGCTGATAAGACTAAT
GTTATTGGGAAGATGATACCAGGTTGGAAGATTGTTTACTCTGGTGACACTAGGCCTTGT
CCGGAACTGGTTGAAGCCTCTCGTGGAGCAACAGTTTTCATACATGAGGCTACGTTTGAA
GATGGTATGGTGGAAGAAGCTATAGCGAAAAATCACAGCACAATGGGGGAAGCTGTTGAT
GCAGGGGACGCTGCTGGAGCATATCGCGTCATCCTCACTCACTTCAGCCAAAGATACCCT
AAAATTCCAGTATTTGATGAATCATACATGAATAAAGCGTGCGTAGCTTTTGATCTGATG
AGCGTTAACTTAGCTGACCTGCCCATGCTTCCAAGAGTTCTTCCATATCTTAAACTCCTG
TTTCGTGATGAAATAGTTGTTCATGAATCTGATGATGTCAATTCTGCTATAGCGGAGGTT
TAG

Peptide Sequence

PEP ID

XP_016503581.1
PEP Infomation

PREDICTED: zinc phosphodiesterase ELAC protein 2-like isoform X2 [Nicotiana tabacum]
Sequence

MKSFVPNAAMVHTHSVLSTHGSNEVASADSMKFDHLYVPIVDEVVKICAIPLRPRCSKVC
DPMKEGSSKLNAPLVDDYHFAEDLQAQMKNSTAEDALDPGDISVVYICEFPEIKGKLDRD
KAAELGLESGPKYGELKRGNPVKSDHLDRTIHPCDVMEPSFPGPIVLLVDCPTLSHLQEL
SSLQSLTLYYSNTSEQPVEMCKKVNCLIHLSPASVTNTTAYEQWMTRFGEAQHIMAGHEP
KNIEIPILKSSSRIAAKLNYLCPQFFPAPGFLTLKQLKSLPSVSRFPRELSLPTSCRFIY
AENLLKFNLLPYKDLGLDNSGVADTFSRTEIIDELTSEIPEIVSASEHIIQLWHGNNGTN
GGTPLPSCLEGITREDMEIVLLGTGSSQPSKYRNVSSIFINLFSKGGILLDCGEGTLGQL
KRRFGVEGADEAVKGLRCIWISHIHADHHAGLARILTLRRDLLNETPHEPLIVVGPQQLE
IFLDRYQMLEDLDMQFLDSRDTTKSSWEAFELNEDNDANGSASRLKNTLRESGLISLNSV
PVIHCPQAYGIVLKAADKTNVIGKMIPGWKIVYSGDTRPCPELVEASRGATVFIHEATFE
DGMVEEAIAKNHSTMGEAVDAGDAAGAYRVILTHFSQRYPKIPVFDESYMNKACVAFDLM
SVNLADLPMLPRVLPYLKLLFRDEIVVHESDDVNSAIAEV

Transcript Sequence

Gene sequence data has not been registered.